Browsing by Subject "high-throughput sequencing"

Now showing items 1-2 of 2

    • Phytoref: a reference database of the plastidial 16s rrna gene of photosynthetic eukaryotes with curated taxonomy 

      Decelle, Johan; Romac, Sarah; Stern, Rowena F.; Bendif, El Mahdi; Zingone, Adriana; Audic, Stéphane; Guiry, Michael D.; Guillou, Laure; Tessier, Désiré; Le Gall, Florence; Gourvil, Priscillia; Dos Santos, Adriana L.; Probert, Ian; Vaulot, Daniel; de Vargas, Colomban; Christen, Richard (Wiley-Blackwell, 2015-04-06)
      Photosynthetic eukaryotes have a critical role as the main producers in most ecosystems of the biosphere. The ongoing environmental metabarcoding revolution opens the perspective for holistic ecosystems biological studies ...

    • Qtrim: a novel tool for the quality trimming of sequence reads generated using the roche/454 sequencing platform 

      Shrestha, Ram; Lubinsky, Baruch; Bansode, Vijay B; Moinz, Mónica BJ; McCormack, Grace P; Travers, Simon A (Springer Nature, 2014-01-01)
      Background: Many high throughput sequencing (HTS) approaches, such as the Roche/454 platform, produce sequences in which the quality of the sequence (as measured by a Phred-like quality scores) decreases linearly across a ...