Browsing Data Science Institute (Scholarly Articles) by Title
Now showing items 1-20 of 72
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Abstract A27: A linked data approach to discover HPV oncoprotiens and RB1 induced mutation associations for the retinoblastoma research
(American Association for Cancer Research, 2017-01)Background: LOSS or GAIN in tumor suppressor gene RB1 play a significant role as in case of loss low penetrance where only 39% of eye at risk develops in retinoblastoma. This research covers the multiple mutation types and ... -
Advancing clinical research by semantically interconnecting aggregated medical data information in a secure context
(Springer Verlag, 2017-03-22)Electronic Health Records (EHRs) contain an increasing wealth of medical information. When combined with molecular level data, they enhance the understanding of the underlying biological mechanisms of diseases, enabling ... -
Applying the concepts of extended products and extended enterprises to support the activities of dynamic supply networks in the agri-food industry
(Elsevier, 2005)During the last decade industry focus has been on the development and integration of processes in the context of the food supply chain. As a result, the food supply chain can be considered highly integrated where information ... -
Approximate Semantic Matching of Events for the Internet of Things
(ACM, 2014-07-01)Event processing follows a decoupled model of interaction in space, time, and synchronization. However,another dimension of semantic coupling also exists and poses a challenge to the scalability of event processing systems ... -
Architecture of Linked Data Applications
(CRC Press (Taylor & Francis), 2014)In this chapter, we first perform an empirical survey of RDF-based applications over most of the past decade, from 2003 to 2009. As the Linked Data principles where introduced in 2006, this allows us to describe the current ... -
Beyond the PDF [At the Event report]
(2011)'Beyond the PDF' brought together around 80 people to the University of California San Diego to discuss scholarly communication, primarily in the sciences. The main topic: How can we apply emergent technologies to improve ... -
Big linked cancer data: Integrating linked TCGA and PubMed
(Elsevier, 2014-07-07)The amount of bio-medical data available on the Web grows exponentially with time. The resulting large volume of data makes manual exploration very tedious. Moreover, the velocity at which this data changes and the variety ... -
Big linked cancer data: Integrating linked TCGA and PubMed
(Elsevier ScienceDirect, 2014-07-16)The amount of bio-medical data available on the Web grows exponentially with time. The resulting large volume of data makes manual exploration very tedious. Moreover, the velocity at which this data changes and the variety ... -
Biological applications of knowledge graph embedding models
(Oxford University Press (OUP), 2020-02-17)Complex biological systems are traditionally modelled as graphs of interconnected biological entities. These graphs, i.e. biological knowledge graphs, are then processed using graph exploratory approaches to perform different ... -
A case study of collecting dynamic social data: The pro-ana twitter community
(Australian National University, College of Engineering and Computer Science, Department of Computer Science, 2015)The study of social processes in on-line social media content is a relatively new and rapidly growing endeavour. Many social media platforms provide a public API (Application Programming Interface) which can be used for ... -
Churn in Social Networks
(Springer, 2010)Telcom networks, online gaming communities, online communities and discussion forums all have one thing in common: they all can be represented by a network of the social links between people. The links in this social network ... -
A collaborative methodology for developing a semantic model for interlinking Cancer Chemoprevention linked-data sources
(IOS press, 2013)This paper proposes a collaborative methodology for developing semantic data models. The proposed methodology for the semantic model development follows a meet-in-the-middle approach. On the ... -
The colloquial WordNet: Extending Princeton WordNet with neologisms
(Springer International Publishing, 2017-05-27)Princeton WordNet is one of the most important resources for natural language processing, but has not been updated for over ten years and is not suitable for analyzing the fast moving language as used on social media. We ... -
A comparison of emotion annotation approaches for text
(MDPI, 2018-05-11)While the recognition of positive/negative sentiment in text is an established task with many standard data sets and well developed methodologies, the recognition of a more nuanced affect has received less attention: there ... -
A decade of Semantic Web research through the lenses of a mixed methods approach
(IOS Press, 2019-06-20)The identification of research topics and trends is an important scientometric activity, as it can help guide the direction of future research. In the Semantic Web area, initially topic and trend detection was primarily ... -
Discovering Domain-Specific Public SPARQL Endpoints: A Life-Sciences Use-Case
(2014)[no abstract available] -
Discovering protein drug targets using knowledge graph embeddings
(Oxford University Press, 2019-08-01)Motivation Computational approaches for predicting drug-target interactions (DTIs) can provide valuable insights into the drug mechanism of action. DTI predictions can help to quickly identify new promising (on-target) ... -
Embedding non-ground logic programs into autoepistemic logic for knowledge base combination
(2011)In the context of the Semantic Web, several approaches to the combination of ontologies, given in terms of theories of classical first-order logic and rule bases, have been proposed. They either cast rules into classical ...