Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models
| dc.contributor.author | Mahony, Sean | |
| dc.contributor.author | Smith, Terry | |
| dc.date.accessioned | 2014-02-05T16:11:14Z | |
| dc.date.available | 2014-02-05T16:11:14Z | |
| dc.date.issued | 2004-03-05 | |
| dc.identifier.citation | Mahony, S,McInerney, JO,Smith, TJ,Golden, A (2004) 'Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models'. BMC Bioinformatics, 5 . | en_US |
| dc.identifier.uri | http://hdl.handle.net/10379/4153 | |
| dc.description | Journal article (open access) | en_US |
| dc.description.abstract | This work explores a new approach to gene-prediction, based on the Self-Organizing Map, which has the ability to automatically identify multiple gene models within a genome. The current implementation, named RescueNet, uses relative synonymous codon usage as the indicator of protein-coding potential. | en_US |
| dc.description.sponsorship | IRCSET | en_US |
| dc.format | application/pdf | en_US |
| dc.language.iso | en | en_US |
| dc.relation.ispartof | BMC Bioinformatics | en |
| dc.rights | Attribution-NonCommercial-NoDerivs 3.0 Ireland | |
| dc.rights.uri | https://creativecommons.org/licenses/by-nc-nd/3.0/ie/ | |
| dc.subject | Complete genome sequence | en_US |
| dc.subject | Horizontally transferred genes | en_US |
| dc.subject | Synonymous codon usage | en_US |
| dc.subject | Borrelia-burgdorferi | en_US |
| dc.subject | Bacterial genome | en_US |
| dc.subject | Base composition | en_US |
| dc.subject | Selection | en_US |
| dc.subject | Identification | en_US |
| dc.subject | Arabidopsis | en_US |
| dc.subject | Annotation | en_US |
| dc.title | Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models | en_US |
| dc.type | Article | en_US |
| dc.date.updated | 2013-10-07T15:38:58Z | |
| dc.identifier.doi | 10.1186/1471-2105-5-23 | |
| dc.local.publishedsource | http://dx.doi.org/10.1186/1471-2105-5-23 | en_US |
| dc.description.peer-reviewed | peer-reviewed | |
| dc.internal.rssid | 1131650 | |
| dc.local.contact | Terry Smith, School Of Natural Sciences, Nui Galway. 5488 Email: terry.smith@nuigalway.ie | |
| dc.local.copyrightchecked | No | |
| dc.local.version | ACCEPTED | |
| nui.item.downloads | 296 |
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