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Now showing items 1-9 of 9
Querying web polystores
(IEEE, 2017-12-11)
The database, semantic web, and linked data communities have proposed solutions that federate queries over multiple data sources using a single data model. Nowadays, the data retrieval requirements originating from versatile ...
Towards precision medicine: discovering novel gynecological cancer biomarkers and pathways using linked data
(BioMed Central, 2017-09-19)
Next Generation Sequencing (NGS) is playing a key role in therapeutic decision making for the cancer prognosis and treatment. The NGS technologies are producing a massive amount of sequencing datasets. Often, these datasets ...
A deep learning approach to genomics data for population scale clustering and ethnicity prediction
(CEUR-WS.org, 2017-05-28)
The understanding of variations in genome sequences assists us in identifying
people who are predisposed to common diseases, solving rare diseases, and finding
corresponding population group of the individuals from a ...
Linked functional annotation for differentially expressed gene (DEG) demonstrated using Illumina Body Map 2.0
(CEUR-WS.org, 2015-12-09)
Semantic Web technologies are core for the integration of
disparate data resources. It can be used to exploit data from next generation
sequencing (NGS) for therapeutic decisions regarding cancer. In
this manuscript, ...
Improving data workflow systems with cloud services and use of open data for bioinformatics research
(Oxford University Press, 2017-04-16)
Data workflow systems (DWFSs) enable bioinformatics researchers to combine components for data access and data analytics, and to share the final data analytics approach with their collaborators. Increasingly, such systems ...
Where to search top-K biomedical ontologies?
(Oxford University Press, 2018-03-20)
Motivation
Searching for precise terms and terminological definitions in the biomedical data space is problematic, as researchers find overlapping, closely related and even equivalent concepts in a single or multiple ...
SAFE: SPARQL federation over RDF data cubes with access control
(BioMed Central, 2017-02-01)
Several query federation engines have been proposed for accessing public Linked Open Data sources. However, in many domains, resources are sensitive and access to these resources is tightly controlled by stakeholders; ...
Linked data cased multi-omics integration and visualization for cancer decision networks
(Springer Verlag, 2018-12-30)
Visualization of Gene Expression (GE) is a challenging task since the number of genes and their associations are difficult to predict in various set of biological studies. GE could be used to understand tissue-gene-protein ...
Deep convolution neural network model to predict relapse in breast cancer
(IEEE, 2018-12-17)
A mishap in anti-cancer drug distribution is critical in breast cancer patients due to poor prediction model to identify the treatment regime in ER+ve and ER-ve (Estrogen Receptor (ER)) patients. The traditional method for ...