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Querying web polystores
(IEEE, 2017-12-11)
The database, semantic web, and linked data communities have proposed solutions that federate queries over multiple data sources using a single data model. Nowadays, the data retrieval requirements originating from versatile ...
Towards precision medicine: discovering novel gynecological cancer biomarkers and pathways using linked data
(BioMed Central, 2017-09-19)
Next Generation Sequencing (NGS) is playing a key role in therapeutic decision making for the cancer prognosis and treatment. The NGS technologies are producing a massive amount of sequencing datasets. Often, these datasets ...
A deep learning approach to genomics data for population scale clustering and ethnicity prediction
(CEUR-WS.org, 2017-05-28)
The understanding of variations in genome sequences assists us in identifying
people who are predisposed to common diseases, solving rare diseases, and finding
corresponding population group of the individuals from a ...
Linked functional annotation for differentially expressed gene (DEG) demonstrated using Illumina Body Map 2.0
(CEUR-WS.org, 2015-12-09)
Semantic Web technologies are core for the integration of
disparate data resources. It can be used to exploit data from next generation
sequencing (NGS) for therapeutic decisions regarding cancer. In
this manuscript, ...
A linked data visualiser for finite element biosimulations
(IEEE, 2016-02-04)
Biosimulation models are used to understand the multiple or different causative factors that cause impairment in human organs. Finite Element Method (FEM) provide a mathematical framework to simulate dynamic biological ...
Improving data workflow systems with cloud services and use of open data for bioinformatics research
(Oxford University Press, 2017-04-16)
Data workflow systems (DWFSs) enable bioinformatics researchers to combine components for data access and data analytics, and to share the final data analytics approach with their collaborators. Increasingly, such systems ...
Abstract A27: A linked data approach to discover HPV oncoprotiens and RB1 induced mutation associations for the retinoblastoma research
(American Association for Cancer Research, 2017-01)
Background: LOSS or GAIN in tumor suppressor gene RB1 play a significant role as in case of loss low penetrance where only 39% of eye at risk develops in retinoblastoma. This research covers the multiple mutation types and ...
Where to search top-K biomedical ontologies?
(Oxford University Press, 2018-03-20)
Motivation
Searching for precise terms and terminological definitions in the biomedical data space is problematic, as researchers find overlapping, closely related and even equivalent concepts in a single or multiple ...
A linked data visualiser for finite element biosimulations
(World Scientific Publishing, 2016)
Biosimulation models are used to understand the multiple or different causative factors that cause impairment in human organs. Finite Element Method (FEM) provide a mathematical framework to simulate dynamic biological ...